HIV pixel clustering (frequencies) - compare methods for hClustering

1 Correlations

2 Enrichment score

3 Graph analysis

3.1 Corr cut-off=0.9, ES cutoff=0.9

## [1] "Average edge weights (number of methods that agree): 1.66988210075027"
## [1] "Count of edge weights: "
## upper_adj
##    0    1    2    3    4 
## 4017  549  204  119   61

3.2 Corr cut-off=0.75, ES cutoff=0.75

## [1] "Average edge weights (number of methods that agree): 1.58532778355879"
## [1] "Count of edge weights: "
## upper_adj
##    0    1    2    3    4 
## 3028 1140  527  167   88

3.3 Corr cut-off=0.6, ES cutoff=0.6

## [1] "Average edge weights (number of methods that agree): 1.60218849276385"
## [1] "Count of edge weights: "
## upper_adj
##    0    1    2    3    4 
## 2117 1545  976  206  106